Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh1F7BJK1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh1F7BJK1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh1F7BJK1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh1F7BJK1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh1F7BJK1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms