Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Atf6F6VAN0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Atf6F6VAN0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Atf6F6VAN0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Atf6F6VAN0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm7488-201ENSMUST00000117148 684 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm37917-201ENSMUST00000194711 392 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gm45841-201ENSMUST00000207700 164 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.64□□□□□ -0.23
Atf6F6VAN0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf6F6VAN0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Mir874-201ENSMUST00000104769 76 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm5866-201ENSMUST00000177881 973 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm38223-201ENSMUST00000194484 695 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm18307-201ENSMUST00000206864 949 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm18624-201ENSMUST00000220966 658 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.63□□□□□ -0.23
Atf6F6VAN0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf6F6VAN0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf6F6VAN0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms