Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Gm25927-201ENSMUST00000175058 117 ntBASIC12.04□□□□□ -0.48
Gm3543D3Z235 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm3543D3Z235 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm15678-201ENSMUST00000117573 960 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm14127-201ENSMUST00000117906 678 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm15429-201ENSMUST00000151268 798 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm8602-201ENSMUST00000184045 607 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm27892-201ENSMUST00000185017 106 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm38223-201ENSMUST00000194484 695 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.03□□□□□ -0.48
Gm3543D3Z235 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm3543D3Z235 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.02□□□□□ -0.48
Gm3543D3Z235 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.02□□□□□ -0.48
Gm3543D3Z235 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm3543D3Z235 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gm15824-201ENSMUST00000119516 955 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Mir1894-201ENSMUST00000122802 81 ntBASIC12.02□□□□□ -0.49
Gm3543D3Z235 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm3543D3Z235 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms