Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Gm8805-201ENSMUST00000117848 313 ntBASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Acot6-202ENSMUST00000222921 3622 ntBASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmf1B9EKI3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Gm12384-201ENSMUST00000119228 919 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Gm27682-201ENSMUST00000183930 110 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmf1B9EKI3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm2231-201ENSMUST00000125661 612 ntBASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm8062-201ENSMUST00000139696 444 ntBASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Snora78-201ENSMUST00000158630 128 ntBASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.92■□□□□ 0.46
Tmf1B9EKI3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tmf1B9EKI3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.91■□□□□ 0.46
Tmf1B9EKI3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmf1B9EKI3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmf1B9EKI3 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.91■□□□□ 0.46
Tmf1B9EKI3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tmf1B9EKI3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms