Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Gm12887B1AVM1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Paupar-201ENSMUST00000194826 3482 ntBASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Mir7221-201ENSMUST00000184009 72 ntBASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm6916-202ENSMUST00000205523 195 ntBASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Gm12887B1AVM1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm15770-201ENSMUST00000117498 584 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm8927-201ENSMUST00000181978 981 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm45841-201ENSMUST00000207700 164 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Gm3222-201ENSMUST00000071282 990 ntBASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Gm12887B1AVM1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms