Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Gm6447-201ENSMUST00000118905 835 ntBASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Gm42550-201ENSMUST00000201553 960 ntBASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb1A2AQ07 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Gm26315-201ENSMUST00000083890 321 ntBASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tubb1A2AQ07 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubb1A2AQ07 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tubb1A2AQ07 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm12341-201ENSMUST00000119724 503 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tubb1A2AQ07 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms