Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav12d-1A0N8R0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm4995-201ENSMUST00000117247 432 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm25948-201ENSMUST00000175334 112 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav12d-1A0N8R0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms