Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.9□□□□□ -0.67
Trav18A0A075B656 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav18A0A075B656 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.89□□□□□ -0.67
Trav18A0A075B656 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.89□□□□□ -0.67
Trav18A0A075B656 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm17330-201ENSMUST00000221047 165 ntBASIC10.89□□□□□ -0.67
Trav18A0A075B656 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.89□□□□□ -0.67
Trav18A0A075B656 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav18A0A075B656 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav18A0A075B656 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms