Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gm28631-201ENSMUST00000190740 334 ntBASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn9Q9Z0S7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn9Q9Z0S7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms