Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.64□□□□□ -0.39
Lhx9Q9WUH2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm16177-201ENSMUST00000120728 718 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm26315-201ENSMUST00000083890 321 ntBASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lhx9Q9WUH2 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Lhx9Q9WUH2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms