Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Mir874-201ENSMUST00000104769 76 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn8aQ9WTU3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Gm13786-201ENSMUST00000122371 333 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Scn8aQ9WTU3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Mir339-201ENSMUST00000083659 96 ntBASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn8aQ9WTU3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.26□□□□□ -0.29
Scn8aQ9WTU3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms