Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm6983-201ENSMUST00000214912 628 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm5161-201ENSMUST00000075243 853 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm24447-201ENSMUST00000083977 338 ntBASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clcf1Q9QZM3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Clcf1Q9QZM3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clcf1Q9QZM3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clcf1Q9QZM3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm15371-201ENSMUST00000117057 784 ntBASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Mir1894-201ENSMUST00000122802 81 ntBASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.08□□□□□ -0.48
Clcf1Q9QZM3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm12928-201ENSMUST00000117115 573 ntBASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm38223-201ENSMUST00000194484 695 ntBASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clcf1Q9QZM3 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms