Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Gm7063-201ENSMUST00000186840 981 ntBASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Gm7287-201ENSMUST00000205267 602 ntBASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Gm7653-201ENSMUST00000214567 508 ntBASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb3Q9JKS4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm14350-201ENSMUST00000116642 640 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm13612-201ENSMUST00000119276 390 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.05□□□□□ -0.48
Ldb3Q9JKS4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Mir874-201ENSMUST00000104769 76 ntBASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm8598-201ENSMUST00000221184 836 ntBASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.04□□□□□ -0.48
Ldb3Q9JKS4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms