Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim39Q9ESN2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Gm27321-201ENSMUST00000185021 205 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Gm44872-201ENSMUST00000207864 420 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Gm9063-201ENSMUST00000223299 582 ntBASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim39Q9ESN2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm42660-201ENSMUST00000197733 947 ntBASIC12.47□□□□□ -0.41
Trim39Q9ESN2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm7775-201ENSMUST00000218871 853 ntBASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim39Q9ESN2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms