Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1cQ9ES64 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Gm11025-201ENSMUST00000140773 466 ntBASIC15.22■□□□□ 0.03
Ush1cQ9ES64 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1cQ9ES64 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.21■□□□□ 0.03
Ush1cQ9ES64 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.21■□□□□ 0.03
Ush1cQ9ES64 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1cQ9ES64 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ush1cQ9ES64 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Ush1cQ9ES64 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.21■□□□□ 0.02
Ush1cQ9ES64 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ush1cQ9ES64 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ush1cQ9ES64 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ush1cQ9ES64 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm6973-201ENSMUST00000117080 721 ntBASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Rpph1-201ENSMUST00000175096 319 ntBASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ush1cQ9ES64 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms