Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm29741-201ENSMUST00000192667 421 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rtp4Q9ER80 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm12390-201ENSMUST00000117897 397 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm12485-201ENSMUST00000119641 291 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm27772-201ENSMUST00000184900 187 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.47□□□□□ -0.41
Rtp4Q9ER80 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms