Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mmp1bQ9EPL6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm15920-201ENSMUST00000118998 402 ntBASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm15653-201ENSMUST00000119247 907 ntBASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Dupd1-202ENSMUST00000224735 548 ntBASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
Mmp1bQ9EPL6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Mir874-201ENSMUST00000104769 76 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm8927-201ENSMUST00000181978 981 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Mir6956-201ENSMUST00000183598 62 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Gm3222-201ENSMUST00000071282 990 ntBASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Mmp1bQ9EPL6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Mmp1bQ9EPL6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms