Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc3Q9CWU5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm27437-201ENSMUST00000183429 107 ntBASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc3Q9CWU5 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc3Q9CWU5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.75□□□□□ -0.37
Khdc3Q9CWU5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms