Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm10156-201ENSMUST00000122364 462 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm24644-201ENSMUST00000157114 139 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm29127-201ENSMUST00000188304 517 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm43438-201ENSMUST00000198133 379 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm12203-201ENSMUST00000118235 598 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm13369-201ENSMUST00000119442 987 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm12209-201ENSMUST00000120089 596 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Mir1982-201ENSMUST00000157368 74 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm22993-201ENSMUST00000175423 254 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm29649-201ENSMUST00000185649 419 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.6□□□□□ -0.39
Otud1Q9CUB6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Otud1Q9CUB6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Otud1Q9CUB6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms