Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm6659-201ENSMUST00000174752 547 ntBASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm27920-201ENSMUST00000183953 96 ntBASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm5989-201ENSMUST00000096092 2077 ntBASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm7230-201ENSMUST00000173026 815 ntBASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl39lQ9CQD0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl39lQ9CQD0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl39lQ9CQD0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms