Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa3Q9CQ71 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Gm27701-201ENSMUST00000184498 110 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa3Q9CQ71 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gm6745-201ENSMUST00000199216 526 ntBASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa3Q9CQ71 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpa3Q9CQ71 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms