Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm14822-201ENSMUST00000122247 291 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm27702-201ENSMUST00000184512 56 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm21470-201ENSMUST00000187680 696 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Dupd1-202ENSMUST00000224735 548 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Krt88Q9CPR6 AC225888.1-201ENSMUST00000227184 728 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm13385-201ENSMUST00000121089 220 ntBASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.99□□□□□ -0.49
Krt88Q9CPR6 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Krt88Q9CPR6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Krt88Q9CPR6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms