Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim16Q99PP9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Gm24420-201ENSMUST00000176676 59 ntBASIC13.02□□□□□ -0.33
Trim16Q99PP9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.02□□□□□ -0.33
Trim16Q99PP9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.02□□□□□ -0.33
Trim16Q99PP9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.02□□□□□ -0.33
Trim16Q99PP9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim16Q99PP9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Gm5866-201ENSMUST00000177881 973 ntBASIC13.01□□□□□ -0.33
Trim16Q99PP9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.01□□□□□ -0.33
Trim16Q99PP9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms