Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm25668-201ENSMUST00000157700 129 ntBASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm17376-201ENSMUST00000166016 84 ntBASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm8738-201ENSMUST00000172606 329 ntBASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm18827-201ENSMUST00000188341 790 ntBASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim34aQ99PP6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm10434-201ENSMUST00000101158 471 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm11964-201ENSMUST00000120982 444 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim34aQ99PP6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gm11222-201ENSMUST00000119005 738 ntBASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gm16570-201ENSMUST00000161951 436 ntBASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Gm6082-201ENSMUST00000215204 454 ntBASIC16.3■□□□□ 0.2
Trim34aQ99PP6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
Trim34aQ99PP6 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms