Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm20445-201ENSMUST00000061905 565 ntBASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf111Q99ML9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Pck2-205ENSMUST00000226352 2784 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm14719-201ENSMUST00000121891 340 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm29667-201ENSMUST00000190817 490 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf111Q99ML9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.9□□□□□ -0.34
Rnf111Q99ML9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf111Q99ML9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf111Q99ML9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.9□□□□□ -0.35
Rnf111Q99ML9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Rnf111Q99ML9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rnf111Q99ML9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms