Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tlr3Q99MB1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Gm6983-201ENSMUST00000214912 628 ntBASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Gm5035-201ENSMUST00000215581 927 ntBASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tlr3Q99MB1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tlr3Q99MB1 Gm11425-201ENSMUST00000119608 498 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Mir7221-201ENSMUST00000184009 72 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm27892-201ENSMUST00000185017 106 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 AY702102-202ENSMUST00000194651 1173 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm44397-201ENSMUST00000195950 113 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm9396-201ENSMUST00000076703 567 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Gm5356-201ENSMUST00000093326 615 ntBASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tlr3Q99MB1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tlr3Q99MB1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms