Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm42997-202ENSMUST00000200321 985 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Nkx6-1Q99MA9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm14726-201ENSMUST00000120623 896 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm13461-201ENSMUST00000120980 662 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm14277-201ENSMUST00000121195 360 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nkx6-1Q99MA9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx6-1Q99MA9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm26956-201ENSMUST00000182176 986 ntBASIC12.45□□□□□ -0.42
Nkx6-1Q99MA9 Gm2445-201ENSMUST00000182798 989 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms