Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gm5279-201ENSMUST00000199575 745 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12151-201ENSMUST00000121374 290 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm14719-201ENSMUST00000121891 340 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gm9797-201ENSMUST00000052902 613 ntBASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cstf3Q99LI7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cstf3Q99LI7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms