Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Mir698-201ENSMUST00000102164 109 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm24420-201ENSMUST00000176676 59 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm2445-201ENSMUST00000182798 989 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm18905-201ENSMUST00000205454 928 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp11Q99K46 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.03□□□□□ -0.16
Usp11Q99K46 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp11Q99K46 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Usp11Q99K46 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.02□□□□□ -0.16
Usp11Q99K46 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp11Q99K46 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp11Q99K46 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.02□□□□□ -0.16
Usp11Q99K46 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp11Q99K46 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp11Q99K46 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp11Q99K46 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Usp11Q99K46 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.01□□□□□ -0.17
Usp11Q99K46 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usp11Q99K46 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.01□□□□□ -0.17
Usp11Q99K46 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp11Q99K46 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp11Q99K46 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms