Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Gm14127-201ENSMUST00000117906 678 ntBASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Gm29649-201ENSMUST00000185649 419 ntBASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Gm6266-201ENSMUST00000203844 806 ntBASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Gm29705-201ENSMUST00000212598 474 ntBASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.15□□□□□ -0.15
Pcdha2Q91Y17 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm13369-201ENSMUST00000119442 987 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm13829-201ENSMUST00000119600 138 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha2Q91Y17 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm8805-201ENSMUST00000117848 313 ntBASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm4271-201ENSMUST00000174444 973 ntBASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm28693-202ENSMUST00000190758 331 ntBASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm19931-201ENSMUST00000198920 368 ntBASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha2Q91Y17 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms