Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm42550-201ENSMUST00000201553 960 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm6983-201ENSMUST00000214912 628 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha3Q91Y16 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm12138-201ENSMUST00000122180 951 ntBASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm44397-201ENSMUST00000195950 113 ntBASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.91□□□□□ -0.18
Pcdha3Q91Y16 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms