Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm11424-201ENSMUST00000121929 829 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm44069-201ENSMUST00000204898 506 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha9Q91Y11 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm8213-201ENSMUST00000118191 441 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm19931-201ENSMUST00000198920 368 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm10012-201ENSMUST00000078252 192 ntBASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
Pcdha9Q91Y11 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms