Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Gm42550-201ENSMUST00000201553 960 ntBASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga6Q91XY2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga6Q91XY2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Olfr284-202ENSMUST00000206647 966 ntBASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Nsd1-205ENSMUST00000224693 852 ntBASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga6Q91XY2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gm43138-201ENSMUST00000199123 708 ntBASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gm5363-201ENSMUST00000211927 938 ntBASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga6Q91XY2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms