Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trex1Q91XB0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trex1Q91XB0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.17■□□□□ 0.02
Trex1Q91XB0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trex1Q91XB0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm15236-201ENSMUST00000117309 379 ntBASIC15.16■□□□□ 0.02
Trex1Q91XB0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm8738-201ENSMUST00000172606 329 ntBASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.16■□□□□ 0.02
Trex1Q91XB0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trex1Q91XB0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.16■□□□□ 0.02
Trex1Q91XB0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Gm15808-201ENSMUST00000119046 604 ntBASIC15.15■□□□□ 0.02
Trex1Q91XB0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.15■□□□□ 0.02
Trex1Q91XB0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.15■□□□□ 0.02
Trex1Q91XB0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trex1Q91XB0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.14■□□□□ 0.01
Trex1Q91XB0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trex1Q91XB0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms