Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Tram1Q91V04 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm15770-201ENSMUST00000117498 584 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm12350-201ENSMUST00000121208 462 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm1401-201ENSMUST00000122048 772 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm11025-201ENSMUST00000140773 466 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm28659-201ENSMUST00000188013 759 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Gm45841-201ENSMUST00000207700 164 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.43□□□□□ -0.58
Tram1Q91V04 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tram1Q91V04 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tram1Q91V04 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tram1Q91V04 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.42□□□□□ -0.58
Tram1Q91V04 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.42□□□□□ -0.58
Tram1Q91V04 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm44492-201ENSMUST00000197012 141 ntBASIC11.42□□□□□ -0.58
Tram1Q91V04 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.42□□□□□ -0.58
Tram1Q91V04 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.42□□□□□ -0.58
Tram1Q91V04 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.42□□□□□ -0.58
Tram1Q91V04 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tram1Q91V04 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms