Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Nup35Q8R4R6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Gm14494-201ENSMUST00000118786 435 ntBASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Gm15393-201ENSMUST00000120499 219 ntBASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Mir1897-201ENSMUST00000122581 272 ntBASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Gm9229-201ENSMUST00000222777 126 ntBASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup35Q8R4R6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Mir6990-201ENSMUST00000183724 91 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms