Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm21769-201ENSMUST00000211922 111 ntBASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Morn2-202ENSMUST00000227729 656 ntBASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp7Q8R1T1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Gm8738-201ENSMUST00000172606 329 ntBASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Gm29199-201ENSMUST00000187766 775 ntBASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp7Q8R1T1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gm17376-201ENSMUST00000166016 84 ntBASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp7Q8R1T1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms