Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Gm15653-201ENSMUST00000119247 907 ntBASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd3Q8R1N4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd3Q8R1N4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm15393-201ENSMUST00000120499 219 ntBASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm24158-201ENSMUST00000175263 71 ntBASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm9229-201ENSMUST00000222777 126 ntBASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Shd-206ENSMUST00000225145 998 ntBASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd3Q8R1N4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nudcd3Q8R1N4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms