Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Gm20553-201ENSMUST00000204205 844 ntBASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Mir125a-201ENSMUST00000083545 68 ntBASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Mir5131-201ENSMUST00000175426 93 ntBASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Mir5126-201ENSMUST00000175513 77 ntBASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm27631-201ENSMUST00000184163 466 ntBASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Gm45453-201ENSMUST00000211758 853 ntBASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf4Q8K4J2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ebf4Q8K4J2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ebf4Q8K4J2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf4Q8K4J2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms