Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm38223-201ENSMUST00000194484 695 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Rfwd3Q8CIK8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfwd3Q8CIK8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm15371-201ENSMUST00000117057 784 ntBASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm15678-201ENSMUST00000117573 960 ntBASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm9794-201ENSMUST00000202370 423 ntBASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfwd3Q8CIK8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm13689-201ENSMUST00000119360 685 ntBASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm6745-201ENSMUST00000199216 526 ntBASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Gm9908-201ENSMUST00000211534 448 ntBASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfwd3Q8CIK8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms