Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm11524-201ENSMUST00000119349 807 ntBASIC13.6□□□□□ -0.23
CopaQ8CIE6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.6□□□□□ -0.23
CopaQ8CIE6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm24420-201ENSMUST00000176676 59 ntBASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.6□□□□□ -0.23
CopaQ8CIE6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm15376-201ENSMUST00000122258 783 ntBASIC13.59□□□□□ -0.23
CopaQ8CIE6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm2445-201ENSMUST00000182798 989 ntBASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm27892-201ENSMUST00000185017 106 ntBASIC13.59□□□□□ -0.23
CopaQ8CIE6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.59□□□□□ -0.23
CopaQ8CIE6 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.59□□□□□ -0.23
CopaQ8CIE6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CopaQ8CIE6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CopaQ8CIE6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CopaQ8CIE6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CopaQ8CIE6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CopaQ8CIE6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
CopaQ8CIE6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CopaQ8CIE6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm15824-201ENSMUST00000119516 955 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm2495-201ENSMUST00000191160 466 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm18062-201ENSMUST00000208020 547 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm18055-201ENSMUST00000208254 547 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gm5356-201ENSMUST00000093326 615 ntBASIC13.58□□□□□ -0.24
CopaQ8CIE6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CopaQ8CIE6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms