Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm6736-201ENSMUST00000166583 948 ntBASIC16.45■□□□□ 0.22
Smc5Q8CG46 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm19078-201ENSMUST00000206311 727 ntBASIC16.45■□□□□ 0.22
Smc5Q8CG46 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.45■□□□□ 0.22
Smc5Q8CG46 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc5Q8CG46 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.43■□□□□ 0.22
Smc5Q8CG46 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smc5Q8CG46 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm13616-201ENSMUST00000120600 222 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.42■□□□□ 0.22
Smc5Q8CG46 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smc5Q8CG46 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms