Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Gm4984-201ENSMUST00000115987 360 ntBASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Gm11814-201ENSMUST00000119515 929 ntBASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Polr2bQ8CFI7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Matn2-206ENSMUST00000228570 2798 ntBASIC14.27□□□□□ -0.12
Polr2bQ8CFI7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Polr2bQ8CFI7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Gm43433-201ENSMUST00000196573 481 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Polr2bQ8CFI7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2bQ8CFI7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2bQ8CFI7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2bQ8CFI7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Polr2bQ8CFI7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms