Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm15808-201ENSMUST00000119046 604 ntBASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm17376-201ENSMUST00000166016 84 ntBASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm20482-202ENSMUST00000174729 825 ntBASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm27320-201ENSMUST00000184892 109 ntBASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim52Q8CDV4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Gm38092-201ENSMUST00000195600 653 ntBASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim52Q8CDV4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim52Q8CDV4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Mir877-201ENSMUST00000104738 85 ntBASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim52Q8CDV4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms