Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm9522-201ENSMUST00000182394 926 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vcpip1Q8CDG3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Syt7-204ENSMUST00000223586 1344 ntBASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vcpip1Q8CDG3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms