Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Gm18905-201ENSMUST00000205454 928 ntBASIC15.48■□□□□ 0.07
Vps53Q8CCB4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps53Q8CCB4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gm13226-201ENSMUST00000117838 404 ntBASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gm45331-201ENSMUST00000209868 554 ntBASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps53Q8CCB4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm24420-201ENSMUST00000176676 59 ntBASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm45784-201ENSMUST00000188360 142 ntBASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.46■□□□□ 0.07
Vps53Q8CCB4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms