Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a6Q8C6K9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm12566-201ENSMUST00000121479 359 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Mir7032-201ENSMUST00000185154 79 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm16202-201ENSMUST00000117532 544 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm7467-201ENSMUST00000185173 652 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Gm8959-201ENSMUST00000213150 571 ntBASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a6Q8C6K9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm8738-201ENSMUST00000172606 329 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm28693-202ENSMUST00000190758 331 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm26185-201ENSMUST00000157692 266 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a6Q8C6K9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms