Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.3□□□□□ -0.6
Zim1Q8C393 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Zim1Q8C393 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.3□□□□□ -0.6
Zim1Q8C393 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.3□□□□□ -0.6
Zim1Q8C393 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Zim1Q8C393 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.3□□□□□ -0.6
Zim1Q8C393 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Zim1Q8C393 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Zim1Q8C393 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm12882-201ENSMUST00000121696 517 ntBASIC11.29□□□□□ -0.6
Zim1Q8C393 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.29□□□□□ -0.6
Zim1Q8C393 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Zim1Q8C393 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zim1Q8C393 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Zim1Q8C393 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zim1Q8C393 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms