Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ptcd1Q8C2E4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm2231-201ENSMUST00000125661 612 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm7809-201ENSMUST00000153199 742 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptcd1Q8C2E4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptcd1Q8C2E4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptcd1Q8C2E4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms