Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gm44069-201ENSMUST00000204898 506 ntBASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim47Q8C0E3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim47Q8C0E3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Gm37497-201ENSMUST00000195830 798 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Gm40466-201ENSMUST00000212174 422 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.73□□□□□ -0.05
Trim47Q8C0E3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim47Q8C0E3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Gm45251-201ENSMUST00000209486 1465 ntBASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim47Q8C0E3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms